Results 1 - 20 of 148 are showing below:
Show page:
<< Previous Page | Next Page >>
Acc. No. | Name | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
MIMAT0003716 | ebv-miR-BART17-3p | -47.1 | NC_007605.1 | + | 2857 | 0.69 | 0.985343 |
Target: 5'- -uGGGGGccaucaaGCACCAGGCAcuugACAc -3' miRNA: 3'- auUCCCC-------UGUGGUCCGUa---UGUu -5' |
|||||||
MIMAT0003716 | ebv-miR-BART17-3p | -47.1 | NC_007605.1 | + | 10610 | 0.67 | 0.997869 |
Target: 5'- cAAGGGGACAagUguGGCAgguggGCGGg -3' miRNA: 3'- aUUCCCCUGU--GguCCGUa----UGUU- -5' |
|||||||
MIMAT0003716 | ebv-miR-BART17-3p | -47.1 | NC_007605.1 | + | 38289 | 0.67 | 0.995625 |
Target: 5'- --cGGGGGCAgCCGGGCGgcCGc -3' miRNA: 3'- auuCCCCUGU-GGUCCGUauGUu -5' |
|||||||
MIMAT0003716 | ebv-miR-BART17-3p | -47.1 | NC_007605.1 | + | 38343 | 0.67 | 0.996315 |
Target: 5'- gUGGGGGGugGCCccgcuGGGCAccgcUGCGc -3' miRNA: 3'- -AUUCCCCugUGG-----UCCGU----AUGUu -5' |
|||||||
MIMAT0003716 | ebv-miR-BART17-3p | -47.1 | NC_007605.1 | + | 38414 | 0.67 | 0.995625 |
Target: 5'- --cGGGGGCAgCCGGGCGgcCGc -3' miRNA: 3'- auuCCCCUGU-GGUCCGUauGUu -5' |
|||||||
MIMAT0003716 | ebv-miR-BART17-3p | -47.1 | NC_007605.1 | + | 38468 | 0.67 | 0.996315 |
Target: 5'- gUGGGGGGugGCCccgcuGGGCAccgcUGCGc -3' miRNA: 3'- -AUUCCCCugUGG-----UCCGU----AUGUu -5' |
|||||||
MIMAT0003716 | ebv-miR-BART17-3p | -47.1 | NC_007605.1 | + | 38539 | 0.67 | 0.995625 |
Target: 5'- --cGGGGGCAgCCGGGCGgcCGc -3' miRNA: 3'- auuCCCCUGU-GGUCCGUauGUu -5' |
|||||||
MIMAT0003716 | ebv-miR-BART17-3p | -47.1 | NC_007605.1 | + | 38593 | 0.67 | 0.996315 |
Target: 5'- gUGGGGGGugGCCccgcuGGGCAccgcUGCGc -3' miRNA: 3'- -AUUCCCCugUGG-----UCCGU----AUGUu -5' |
|||||||
MIMAT0003716 | ebv-miR-BART17-3p | -47.1 | NC_007605.1 | + | 38664 | 0.67 | 0.995625 |
Target: 5'- --cGGGGGCAgCCGGGCGgcCGc -3' miRNA: 3'- auuCCCCUGU-GGUCCGUauGUu -5' |
|||||||
MIMAT0003716 | ebv-miR-BART17-3p | -47.1 | NC_007605.1 | + | 38718 | 0.67 | 0.996315 |
Target: 5'- gUGGGGGGugGCCccgcuGGGCAccgcUGCGc -3' miRNA: 3'- -AUUCCCCugUGG-----UCCGU----AUGUu -5' |
|||||||
MIMAT0003716 | ebv-miR-BART17-3p | -47.1 | NC_007605.1 | + | 38789 | 0.67 | 0.995625 |
Target: 5'- --cGGGGGCAgCCGGGCGgcCGc -3' miRNA: 3'- auuCCCCUGU-GGUCCGUauGUu -5' |
|||||||
MIMAT0003716 | ebv-miR-BART17-3p | -47.1 | NC_007605.1 | + | 38843 | 0.67 | 0.996315 |
Target: 5'- gUGGGGGGugGCCccgcuGGGCAccgcUGCGc -3' miRNA: 3'- -AUUCCCCugUGG-----UCCGU----AUGUu -5' |
|||||||
MIMAT0003716 | ebv-miR-BART17-3p | -47.1 | NC_007605.1 | + | 38914 | 0.66 | 0.998832 |
Target: 5'- --cGGGGGCAgCGGGCGgcCGc -3' miRNA: 3'- auuCCCCUGUgGUCCGUauGUu -5' |
|||||||
MIMAT0003716 | ebv-miR-BART17-3p | -47.1 | NC_007605.1 | + | 38967 | 0.67 | 0.996315 |
Target: 5'- gUGGGGGGugGCCccgcuGGGCAccgcUGCGc -3' miRNA: 3'- -AUUCCCCugUGG-----UCCGU----AUGUu -5' |
|||||||
MIMAT0003716 | ebv-miR-BART17-3p | -47.1 | NC_007605.1 | + | 39038 | 0.67 | 0.995625 |
Target: 5'- --cGGGGGCAgCCGGGCGgcCGc -3' miRNA: 3'- auuCCCCUGU-GGUCCGUauGUu -5' |
|||||||
MIMAT0003716 | ebv-miR-BART17-3p | -47.1 | NC_007605.1 | + | 39092 | 0.67 | 0.996315 |
Target: 5'- gUGGGGGGugGCCccgcuGGGCAccgcUGCGc -3' miRNA: 3'- -AUUCCCCugUGG-----UCCGU----AUGUu -5' |
|||||||
MIMAT0003716 | ebv-miR-BART17-3p | -47.1 | NC_007605.1 | + | 39163 | 0.67 | 0.995625 |
Target: 5'- --cGGGGGCAgCCGGGCGgcCGc -3' miRNA: 3'- auuCCCCUGU-GGUCCGUauGUu -5' |
|||||||
MIMAT0003716 | ebv-miR-BART17-3p | -47.1 | NC_007605.1 | + | 39217 | 0.67 | 0.996315 |
Target: 5'- gUGGGGGGugGCCccgcuGGGCAccgcUGCGc -3' miRNA: 3'- -AUUCCCCugUGG-----UCCGU----AUGUu -5' |
|||||||
MIMAT0003716 | ebv-miR-BART17-3p | -47.1 | NC_007605.1 | + | 39288 | 0.67 | 0.995625 |
Target: 5'- --cGGGGGCAgCCGGGCGgcCGc -3' miRNA: 3'- auuCCCCUGU-GGUCCGUauGUu -5' |
|||||||
MIMAT0003716 | ebv-miR-BART17-3p | -47.1 | NC_007605.1 | + | 39342 | 0.67 | 0.996315 |
Target: 5'- gUGGGGGGugGCCccgcuGGGCAccgcUGCGc -3' miRNA: 3'- -AUUCCCCugUGG-----UCCGU----AUGUu -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home