miRNA display CGI

Results 1 - 8 of 8 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
11353	5'	-52.5	NC_003084.1	+	33430	0.66	0.967622
	Target:  5'- cGAUA--GGUCCAGCauGUGcGCCUCAa- -3' miRNA:   3'- cCUAUugCCAGGUUG--CAC-CGGAGUgc -5'
11353	5'	-52.5	NC_003084.1	+	24057	0.66	0.960776
	Target:  5'- gGGGUu-CGGaCCuguACGUGGaggucCCUCACGa -3' miRNA:   3'- -CCUAuuGCCaGGu--UGCACC-----GGAGUGC- -5'
11353	5'	-52.5	NC_003084.1	+	42867	0.66	0.957003
	Target:  5'- ---cAGCGGUCC-GCG-GGCCUUAg- -3' miRNA:   3'- ccuaUUGCCAGGuUGCaCCGGAGUgc -5'
11353	5'	-52.5	NC_003084.1	+	54359	0.66	0.957003
	Target:  5'- --uUGACGGUCaAACGUGcGCCcaaUCACc -3' miRNA:   3'- ccuAUUGCCAGgUUGCAC-CGG---AGUGc -5'
11353	5'	-52.5	NC_003084.1	+	14563	0.68	0.929189
	Target:  5'- cGAUGACGGUggaCCGACGcgGGCCgagguCGu -3' miRNA:   3'- cCUAUUGCCA---GGUUGCa-CCGGagu--GC- -5'
11353	5'	-52.5	NC_003084.1	+	99232	0.73	0.704068
	Target:  5'- aGGGcgcuuCGGUCCAcaACGUGGCCcaUUACGc -3' miRNA:   3'- -CCUauu--GCCAGGU--UGCACCGG--AGUGC- -5'
11353	5'	-52.5	NC_003084.1	+	39664	0.8	0.327311
	Target:  5'- aGGGUuuCGGUCCGcuGCGguUGGUCUCACGg -3' miRNA:   3'- -CCUAuuGCCAGGU--UGC--ACCGGAGUGC- -5'
11353	5'	-52.5	NC_003084.1	+	97741	1.12	0.002975
	Target:  5'- cGGAUAACGGUCCAACGUGGCCUCACGa -3' miRNA:   3'- -CCUAUUGCCAGGUUGCACCGGAGUGC- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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