miRNA display CGI


Results 1 - 8 of 8 are showing below:
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GenBank Identifier RefSeq Acc. Name
20451026 NC_003788.1 Apple latent spherical virus segment 2

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
15180 - 596 81 19 -26.9 NP_620569 5' arm      3' arm
15179 + 3107 90 21.5 -25.8 NP_620569 5' arm      3' arm
15178 + 464 89 19.5 -25.2 NP_620569 5' arm      3' arm
15177 - 6038 85 20 -21.1 NP_620568 5' arm      3' arm
15176 - 646 90 19.5 -22.9 NP_620568 5' arm      3' arm
15175 - 497 90 19.5 -28.1 NP_620568 5' arm      3' arm
15174 + 5952 89 19 -22.3 NP_620568 5' arm      3' arm
15173 + 4152 90 20.5 -27.1 NP_620568 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.