miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
31011	+	30200	84	20	-27.9	YP_164458		5' arm      3' arm
31012	+	31615	87	19	-25.9	YP_164459		5' arm      3' arm
31013	+	34523	88	21.5	-20.5			5' arm      3' arm
31014	+	35565	83	21	-33.2			5' arm      3' arm
31015	+	35958	90	23.5	-24.5	YP_164461		5' arm      3' arm
31016	+	36711	89	20	-26.3	YP_164461		5' arm      3' arm
31017	+	39203	88	24.5	-30.4	YP_164461		5' arm      3' arm
31018	+	39497	90	23	-24	YP_164461		5' arm      3' arm
31019	+	39960	89	19	-25			5' arm      3' arm
31020	+	40698	89	21.5	-24.8			5' arm      3' arm
31021	+	41478	89	21	-21.3	YP_164463		5' arm      3' arm
31022	+	42474	90	20	-24.8	YP_164463		5' arm      3' arm
31023	+	42734	88	19.5	-23.8	YP_164463		5' arm      3' arm
31024	+	43108	89	19	-23.5	YP_164464		5' arm      3' arm
31025	+	43380	88	20	-23.1	YP_164464		5' arm      3' arm
31026	+	44091	88	21	-24.1	YP_164464		5' arm      3' arm
31027	+	45150	90	20	-26	YP_164464		5' arm      3' arm
31028	+	46145	90	22	-23.9	YP_164465		5' arm      3' arm
31029	+	46466	90	19.5	-22	YP_164465		5' arm      3' arm
31030	+	46936	89	21	-21.3	YP_164466		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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