miRNA display CGI


Results 1 - 20 of 285 are showing below:
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GenBank Identifier RefSeq Acc. Name
51557483 NC_006151.1 Suid herpesvirus 1

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
29370 + 3778 90 26 -24.71 5' arm      3' arm
29491 + 99539 90 23 -29.1 5' arm      3' arm
29494 + 100360 89 21.5 -30.5 5' arm      3' arm
29443 + 64261 89 22 -23.9 5' arm      3' arm
29489 + 98745 90 27 -27.8 5' arm      3' arm
29488 + 98371 90 26 -29.9 5' arm      3' arm
29441 + 62941 86 19 -20.9 5' arm      3' arm
29395 + 21689 88 21 -20 5' arm      3' arm
29425 + 45123 90 19.5 -22.4 5' arm      3' arm
29493 + 100209 90 23 -25.5 5' arm      3' arm
29482 + 95959 87 20.5 -31.9 5' arm      3' arm
29490 + 99234 90 22.5 -28.2 5' arm      3' arm
29496 + 108293 89 19 -24 5' arm      3' arm
29522 - 325 89 19.5 -21.2 5' arm      3' arm
29497 + 109098 83 21 -21.4 5' arm      3' arm
29366 + 2268 84 19.5 -24 5' arm      3' arm
29498 + 110480 86 20 -26.4 5' arm      3' arm
29492 + 99849 86 24 -24.6 5' arm      3' arm
29481 + 95656 90 24 -21.2 5' arm      3' arm
29480 + 95262 89 23 -24 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.