miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
29386	+	17840	89	21.5	-22.4	YP_068330		5' arm      3' arm
29387	+	17935	89	19.5	-25.4	YP_068330		5' arm      3' arm
29388	+	18239	86	19.5	-23	YP_068330		5' arm      3' arm
29389	+	18341	90	22	-28	YP_068330		5' arm      3' arm
29390	+	18554	89	20	-22.3	YP_068330		5' arm      3' arm
29391	+	18738	87	23.5	-21.8	YP_068330		5' arm      3' arm
29392	+	19833	89	21	-24.1	YP_068331		5' arm      3' arm
29393	+	20425	89	21.5	-25.6	YP_068331		5' arm      3' arm
29394	+	21299	90	19	-28.2	YP_068331		5' arm      3' arm
29395	+	21689	88	21	-20			5' arm      3' arm
29396	+	22155	89	21.5	-19.4	YP_068332		5' arm      3' arm
29397	+	22768	89	23	-19.6	YP_068332		5' arm      3' arm
29398	+	22857	86	20	-25.3	YP_068332		5' arm      3' arm
29399	+	23634	88	20	-23.3	YP_068332		5' arm      3' arm
29400	+	25051	89	20	-34.2	YP_068332		5' arm      3' arm
29401	+	25634	87	23	-30.4	YP_068333		5' arm      3' arm
29402	+	26499	90	22.5	-20.4	YP_068333		5' arm      3' arm
29403	+	27138	90	19.5	-26.9	YP_068333		5' arm      3' arm
29404	+	27346	89	22	-26.4	YP_068333		5' arm      3' arm
29405	+	27813	87	22	-31.6	YP_068333		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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