miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
30315603 NC_004764.1 Budgerigar fledgling polyomavirus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
21110 + 4413 89 22 -24.7 5' arm      3' arm
21111 - 857 89 20 -23 NP_848010 5' arm      3' arm
21112 - 1355 89 20 -20.6 NP_848011 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.