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| GenBank Identifier | RefSeq Acc. | Name |
| 9628283 | NC_001663.1 | Hamster polyomavirus |
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ID
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strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 4139 | + | 335 | 87 | 23 | -21.6 | NP_056730 | 5' arm 3' arm | ||
| 4140 | - | 421 | 87 | 21.5 | -20 | NP_056732 | 5' arm 3' arm | ||
| 4141 | - | 4246 | 88 | 21 | -26.2 | NP_056734 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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