miRNA display CGI


Results 1 - 9 of 9 are showing below:
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GenBank Identifier RefSeq Acc. Name
9626526 NC_001449.1 Venezuelan equine encephalitis virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
2491 - 7759 89 20 -29.6 NP_040824 5' arm      3' arm
2493 - 10398 89 20.5 -23.1 NP_040824 5' arm      3' arm
2487 + 8148 85 20.5 -23 NP_040824 5' arm      3' arm
2492 - 10060 90 19.5 -22.2 NP_040824 5' arm      3' arm
2490 - 5512 89 24 -22 NP_040822 5' arm      3' arm
2488 - 219 89 20.5 -21.5 NP_040823 5' arm      3' arm
2485 + 1021 89 19.5 -21.1 NP_040822 5' arm      3' arm
2486 + 6837 90 21.5 -20.1 NP_040822 5' arm      3' arm
2489 - 2453 87 23.5 -19.4 NP_040822 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.