miRNA display CGI


Results 1 - 13 of 13 are showing below:
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GenBank Identifier RefSeq Acc. Name
10181072 NC_002534.1 Lactate dehydrogenase-elevating virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
9528 + 1910 86 23.5 -36.4 NP_065670 5' arm      3' arm
9529 + 2828 90 22 -24.3 NP_065670 5' arm      3' arm
9530 + 3293 87 26 -24.9 NP_065670 5' arm      3' arm
9531 + 4704 89 22 -23.3 NP_065670 5' arm      3' arm
9532 + 6082 89 20.5 -29.4 NP_065670 5' arm      3' arm
9533 + 6814 89 22 -24.8 NP_065671 5' arm      3' arm
9534 + 7855 86 19.5 -23.7 NP_065671 5' arm      3' arm
9535 + 8536 89 22 -23 NP_065671 5' arm      3' arm
9536 + 9339 90 21.5 -24.7 NP_065671 5' arm      3' arm
9537 - 6170 90 19 -26.2 NP_065670 5' arm      3' arm
9538 - 7313 89 22 -29.2 NP_065671 5' arm      3' arm
9539 - 8052 87 20 -20.5 NP_065671 5' arm      3' arm
9540 - 13651 90 19.5 -21.9 NP_065676 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.