miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
16514	+	774	88	19	-23	NP_803170		5' arm      3' arm
16515	+	986	88	26	-33.4	NP_671491		5' arm      3' arm
16516	+	1360	90	20.5	-25	NP_671491		5' arm      3' arm
16517	+	1450	89	21	-21.1	NP_671491		5' arm      3' arm
16518	+	2282	89	21	-19.9	NP_671491		5' arm      3' arm
16519	+	2741	90	22.5	-21.6	NP_671491		5' arm      3' arm
16520	+	3336	89	20	-28.8	NP_671491		5' arm      3' arm
16521	+	4050	90	21	-20.8	NP_671491		5' arm      3' arm
16522	+	5899	89	19.5	-22.6	NP_671491		5' arm      3' arm
16523	+	5993	88	23.5	-28.4	NP_671491		5' arm      3' arm
16524	+	6233	89	20.5	-20.09	NP_671491		5' arm      3' arm
16525	+	6887	87	20.5	-22.9	NP_671491		5' arm      3' arm
16526	+	7472	85	19.5	-28.1	NP_671491		5' arm      3' arm
16527	+	9195	90	19.5	-30.1	NP_671491		5' arm      3' arm
16528	-	244	89	23	-20.4			5' arm      3' arm
16529	-	1819	71	19.5	-24.4	NP_671491		5' arm      3' arm
16530	-	3503	87	21.5	-26.1	NP_671491		5' arm      3' arm
16531	-	3719	90	20.5	-21	NP_671491		5' arm      3' arm
16532	-	4085	88	21.5	-27.2	NP_671491		5' arm      3' arm
16533	-	4499	86	19	-24.8	NP_671491		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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