miRNA display CGI


Results 1 - 20 of 258 are showing below:
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GenBank Identifier RefSeq Acc. Name
22091104 NC_004084.1 Virus PhiCh1

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
16309 + 29202 90 24 -34.9 NP_665959 5' arm      3' arm
16459 - 43098 88 22 -34.4 NP_665986 5' arm      3' arm
16294 + 21579 90 19 -33.8 NP_665949 5' arm      3' arm
16305 + 28276 90 22 -33.3 NP_665957 5' arm      3' arm
16502 - 57539 88 25.5 -32.9 NP_666013 5' arm      3' arm
16449 - 40297 83 24 -32.2 NP_665977 5' arm      3' arm
16319 + 34110 90 19 -31.6 5' arm      3' arm
16333 + 42276 81 20.5 -31.5 NP_665984 5' arm      3' arm
16251 + 1178 89 20.5 -31.3 NP_665920 5' arm      3' arm
16396 - 12033 90 25 -31.2 NP_665936 5' arm      3' arm
16407 - 20156 89 22 -31.1 NP_665947 5' arm      3' arm
16363 + 55470 89 25 -30.9 NP_666011 5' arm      3' arm
16358 + 52677 89 21 -30.5 NP_666004 5' arm      3' arm
16493 - 54321 88 22 -29.8 NP_666007 5' arm      3' arm
16506 - 58465 89 26.5 -29.5 NP_665918 5' arm      3' arm
16311 + 29610 90 21 -29.31 NP_665959 5' arm      3' arm
16268 + 9641 86 22.5 -29.2 NP_665931 5' arm      3' arm
16476 - 49291 87 19.5 -29.1 NP_665998 5' arm      3' arm
16481 - 50423 88 22.5 -29.1 NP_666000 5' arm      3' arm
16468 - 46072 88 20.5 -29 NP_665993 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.