miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
20177488 NC_003651.1 Pelargonium zonate spot virus RNA 3

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
14918 + 1204 90 20 -29.2 NP_619772 5' arm      3' arm
14919 + 1938 90 19.5 -30.5 NP_619773 5' arm      3' arm
14917 + 1616 89 25.5 -22.7 NP_619771 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.