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| GenBank Identifier | RefSeq Acc. | Name |
| 9626219 | NC_001413.1 | Bovine immunodeficiency virus |
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ID
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strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 2309 | + | 8393 | 89 | 19.5 | -26.4 | 5' arm 3' arm | |||
| 2310 | - | 229 | 90 | 19 | -21.4 | 5' arm 3' arm | |||
| 2311 | - | 2141 | 89 | 22 | -24.4 | NP_040563 | 5' arm 3' arm | ||
| 2312 | - | 4006 | 89 | 24.5 | -26.4 | NP_040563 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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