miRNA display CGI


Results 1 - 12 of 12 are showing below:
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GenBank Identifier RefSeq Acc. Name
9626154 NC_001403.1 Fujinami sarcoma virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
2215 - 2676 88 19 -33.8 NP_056889 5' arm      3' arm
2216 - 2792 88 20 -20 NP_056889 5' arm      3' arm
2214 - 2094 88 22.5 -27.3 NP_056889 5' arm      3' arm
2212 + 3316 88 20 -20.8 NP_056889 5' arm      3' arm
2211 + 2922 82 20 -22.6 NP_056889 5' arm      3' arm
2209 + 2521 89 20 -31.4 NP_056889 5' arm      3' arm
2207 + 862 90 20 -26 NP_056889 5' arm      3' arm
2208 + 1118 86 20.5 -24.1 NP_056889 5' arm      3' arm
2206 + 512 82 21 -21.2 NP_056889 5' arm      3' arm
2213 + 4083 86 21.5 -19.8 5' arm      3' arm
2210 + 2815 85 21.5 -28.7 NP_056889 5' arm      3' arm
2205 + 48 90 23 -25.3 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.