miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
12059	+	608	86	19	-26.5	NP_524560		5' arm      3' arm
12060	+	939	88	20	-21.4	NP_524560		5' arm      3' arm
12061	+	2371	89	22	-20.6	NP_524561		5' arm      3' arm
12062	+	3340	89	22.5	-24.7	NP_524562		5' arm      3' arm
12063	+	4741	88	19	-20.5	NP_524563		5' arm      3' arm
12064	+	5445	89	21	-20.4	NP_524563		5' arm      3' arm
12065	+	6530	90	23.5	-26.8	NP_652745		5' arm      3' arm
12066	+	6637	90	21	-26.6	NP_652745		5' arm      3' arm
12067	-	818	90	23	-22.5	NP_524560		5' arm      3' arm
12068	-	949	89	19.5	-25.3	NP_524560		5' arm      3' arm
12069	-	1646	89	19.5	-29	NP_524561		5' arm      3' arm
12070	-	3468	89	23.5	-20.7	NP_524562		5' arm      3' arm
12071	-	4451	88	23	-23.7	NP_524563		5' arm      3' arm
12072	-	5149	89	20.5	-21.2	NP_524563		5' arm      3' arm
12073	-	6619	90	19.5	-20.16	NP_652745		5' arm      3' arm
12074	+	281	89	20	-21.2	NP_524564		5' arm      3' arm
12075	+	898	86	22	-26.7	NP_524565		5' arm      3' arm
12076	+	985	89	22.5	-25.7	NP_524565		5' arm      3' arm
12077	+	1582	90	22	-26.8	NP_524566		5' arm      3' arm
12078	+	1929	90	19	-19.4	NP_524566		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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