miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
30146774 NC_004750.1 Barley yellow dwarf virus - PAV

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
21077 + 1089 90 20.5 -23.6 NP_840067 5' arm      3' arm
21079 - 3555 84 23 -24 NP_840017 5' arm      3' arm
21078 - 3361 90 22.5 -25.5 NP_840017 5' arm      3' arm
21080 - 4754 80 21 -22.9 NP_840017 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.