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GenBank Identifier | RefSeq Acc. | Name |
9629156 | NC_001746.1 | Kennedya yellow mosaic virus |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
5045 | - | 863 | 88 | 20 | -29.3 | NP_044328 | 5' arm 3' arm | ||
5046 | - | 1104 | 87 | 22.5 | -29.9 | NP_044328 | 5' arm 3' arm | ||
5047 | - | 2763 | 88 | 25 | -25.7 | NP_044328 | 5' arm 3' arm | ||
5048 | - | 4339 | 84 | 20.5 | -21.4 | NP_044328 | 5' arm 3' arm | ||
5049 | - | 4672 | 88 | 20.5 | -27.8 | NP_044328 | 5' arm 3' arm | ||
5050 | - | 5435 | 88 | 20.5 | -22.6 | NP_044328 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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