miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
20177417 NC_003632.1 Potato aucuba mosaic virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
14899 - 6651 84 21 -30.4 NP_619750 5' arm      3' arm
14898 - 2397 88 20 -20.8 NP_619745 5' arm      3' arm
14897 + 6518 88 20 -28.7 NP_619750 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.