miRNA display CGI


Results 1 - 9 of 9 are showing below:
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GenBank Identifier RefSeq Acc. Name
26986743 NC_004440.1 Tomato black ring virus RNA 2

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
17427 + 1172 89 25 -24.2 NP_758518 5' arm      3' arm
17419 + 803 89 22.5 -35.5 NP_958814 5' arm      3' arm
17420 + 1139 89 21.5 -19.6 NP_958814 5' arm      3' arm
17421 + 1589 89 21.5 -21.9 NP_958814 5' arm      3' arm
17422 + 3284 90 21.5 -20 NP_958814 5' arm      3' arm
17426 - 5325 86 20.5 -27.1 NP_958814 5' arm      3' arm
17423 - 548 89 21.5 -22.9 NP_958814 5' arm      3' arm
17425 - 1262 89 19 -32.9 NP_958814 5' arm      3' arm
17424 - 1083 86 19 -19.9 NP_958814 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.