miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
19747285 NC_003482.1 Barley mild mosaic virus RNA2

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
13637 - 1761 89 19 -30 NP_604490 5' arm      3' arm
13638 + 5063 90 21.5 -23.6 NP_604491       
13639 - 1425 86 22.5 -19.6 NP_604491 5' arm      3' arm
13640 - 4202 90 20.5 -21.9 NP_604491 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.