miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
27411	+	4702	90	21.5	-29	YP_009200		5' arm      3' arm
27467	-	25318	90	21.5	-19.7	YP_009213		5' arm      3' arm
27472	-	27542	87	21.5	-25.5	YP_009216		5' arm      3' arm
27477	-	29754	90	21.5	-19.4	YP_009220		5' arm      3' arm
27432	+	22909	90	21.5	-21.1	YP_009212		5' arm      3' arm
27478	-	30478	90	21.5	-19.4	YP_009220		5' arm      3' arm
27425	+	12010	89	21.5	-30	YP_009204		5' arm      3' arm
27420	+	9322	90	21.5	-26.4	YP_009202		5' arm      3' arm
27412	+	5506	90	21.5	-24.7	YP_009201		5' arm      3' arm
27462	-	23756	90	21.5	-35.8	YP_009212		5' arm      3' arm
27458	-	21582	89	21.5	-19.9	YP_009210		5' arm      3' arm
27451	-	14784	82	21	-29.8	YP_009205		5' arm      3' arm
27409	+	3513	89	21	-23.8	YP_009199		5' arm      3' arm
27448	-	13522	89	21	-26.7	YP_009204		5' arm      3' arm
27427	+	13643	89	21	-27.6	YP_009205		5' arm      3' arm
27438	+	29121	89	21	-30.3	YP_009220		5' arm      3' arm
27469	-	25915	90	21	-21.5	YP_009213		5' arm      3' arm
27434	+	23278	90	21	-24.7	YP_009212		5' arm      3' arm
27465	-	25066	89	21	-22.3	YP_009213		5' arm      3' arm
27456	-	20734	90	21	-28.6	YP_009210		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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