miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
16732	+	1457	90	20.5	-26.9	NP_690809		5' arm      3' arm
16733	+	1716	89	20	-24.1	NP_690810		5' arm      3' arm
16734	+	1812	80	20.5	-24.6	NP_690810		5' arm      3' arm
16735	+	2678	86	20.5	-21.8			5' arm      3' arm
16736	-	482	90	19	-22.7	NP_690807		5' arm      3' arm
16737	-	772	89	19.5	-26.3	NP_690807		5' arm      3' arm
16738	-	896	89	20.5	-23	NP_690808		5' arm      3' arm
16739	-	1449	88	22	-20.6	NP_690809		5' arm      3' arm
16740	-	1560	88	19	-21.3			5' arm      3' arm
16741	-	1758	89	20.5	-23.8	NP_690810		5' arm      3' arm
16742	-	2664	89	20	-21.5			5' arm      3' arm
16743	+	179	87	21	-24.3			5' arm      3' arm
16744	+	673	90	25.5	-31			5' arm      3' arm
16745	+	830	89	24.5	-23.9	NP_690812		5' arm      3' arm
16746	+	1013	89	21	-22.1	NP_690812		5' arm      3' arm
16747	+	1121	89	22	-19.4	NP_690812		5' arm      3' arm
16748	+	1242	87	23.5	-20.7	NP_690812		5' arm      3' arm
16749	+	1355	90	24	-32.7	NP_690812		5' arm      3' arm
16750	+	3167	89	19	-24.1	NP_690815		5' arm      3' arm
16751	+	3274	89	20	-19.9	NP_690815		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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