miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
9627719 NC_001612.1 Human enterovirus A

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
3491 - 1423 85 19.5 -23.5 NP_042242 5' arm      3' arm
3492 - 2594 89 20 -20.7 NP_042242 5' arm      3' arm
3493 - 5841 89 21.5 -26.7 NP_042242 5' arm      3' arm
3494 - 6034 87 22 -20.6 NP_042242 5' arm      3' arm
3490 + 307 85 24.5 -31.7 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.