miRNA display CGI


Results 1 - 20 of 48 are showing below:
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GenBank Identifier RefSeq Acc. Name
30027774 NC_004735.1 Bacteriophage RM 378

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
20985 + 28951 89 21 -34.54 NP_835619 5' arm      3' arm
21000 - 199 77 28.5 -32.3 NP_835588 5' arm      3' arm
21025 - 125763 90 20.5 -31.1 NP_835728 5' arm      3' arm
21029 - 127455 87 19.5 -30.4 NP_835729 5' arm      3' arm
21016 - 83114 90 21.5 -29.7 NP_835684 5' arm      3' arm
21009 - 39007 85 23 -29.7 NP_835630 5' arm      3' arm
20992 + 45469 84 19 -27.7 NP_835645 5' arm      3' arm
21008 - 37937 90 19 -27 NP_835627 5' arm      3' arm
20987 + 38524 90 23.5 -26.9 NP_835629 5' arm      3' arm
20990 + 39835 90 24.5 -26.9 NP_835631 5' arm      3' arm
21003 - 11976 88 19.5 -26.8 5' arm      3' arm
21010 - 40527 85 19.5 -26.8 NP_835632 5' arm      3' arm
20988 + 38636 85 22.5 -25.82 NP_835629 5' arm      3' arm
20986 + 34063 88 21.5 -25.8 NP_835625 5' arm      3' arm
21015 - 73460 86 19 -25.6 NP_835670 5' arm      3' arm
21017 - 83294 90 21 -24.9 NP_835684 5' arm      3' arm
20989 + 39022 90 23.5 -24.9 NP_835630 5' arm      3' arm
21019 - 84873 87 21 -24.1 NP_835685 5' arm      3' arm
21026 - 125904 86 20.5 -23.9 NP_835728 5' arm      3' arm
21014 - 72470 90 22.5 -23.7 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.