miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
16774	+	1877	90	21.5	-23.9	NP_690823		5' arm      3' arm
16775	+	2140	90	24	-30.6	NP_690823		5' arm      3' arm
16776	+	2843	89	21	-21.5	NP_690823		5' arm      3' arm
16777	+	3767	89	22	-23.2	NP_690824		5' arm      3' arm
16778	+	5465	86	19	-21.1	NP_690825		5' arm      3' arm
16779	+	5841	89	19.5	-23.3	NP_690825		5' arm      3' arm
16780	-	997	90	23	-23.9	NP_690821		5' arm      3' arm
16781	-	1768	90	19.5	-23.9	NP_690823		5' arm      3' arm
16782	-	2710	88	19.5	-21.7	NP_690823		5' arm      3' arm
16783	-	3677	87	19	-23.2	NP_690824		5' arm      3' arm
16784	-	5714	89	19	-20.3	NP_690825		5' arm      3' arm
16785	-	5987	88	19	-19.8	NP_690825		5' arm      3' arm
16786	-	6283	89	21	-21.9	NP_690825		5' arm      3' arm
16787	-	814	90	21	-21.9	NP_690826		5' arm      3' arm
16788	-	1369	90	22.5	-24.7	NP_690828		5' arm      3' arm
16789	-	2001	89	22	-23.7	NP_690829		5' arm      3' arm
16790	+	574	82	23	-26.1			5' arm      3' arm
16791	+	1009	90	19.5	-20	NP_690831		5' arm      3' arm
16792	+	1145	90	25.5	-22.5	NP_690831		5' arm      3' arm
16793	+	2122	89	21.5	-21	NP_690832		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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