miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
22003842 NC_004074.1 Tioman virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
16246 + 156 87 19.5 -24.4 NP_665864 5' arm      3' arm
16247 - 2623 86 20 -20.7 NP_665865 5' arm      3' arm
16248 - 4409 89 22 -25.2 NP_665868 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.