miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
17776	-	263265	89	20.5	-20.7			5' arm      3' arm
17771	-	173855	87	23	-23.8			5' arm      3' arm
17759	+	167806	88	19	-28.8			5' arm      3' arm
17761	+	173769	87	26	-25.6			5' arm      3' arm
17760	+	173075	85	23.5	-28			5' arm      3' arm
17772	-	180027	87	19.5	-20.7			5' arm      3' arm
17774	-	208238	87	20.5	-29.2			5' arm      3' arm
17778	-	277899	89	20.5	-27.7			5' arm      3' arm
17777	-	273375	90	20.5	-19.7			5' arm      3' arm
17770	-	167972	89	22	-26.5			5' arm      3' arm
17767	-	114324	80	20.5	-19.5			5' arm      3' arm
17755	+	126740	90	22.5	-26.9			5' arm      3' arm
17754	+	126006	89	20.5	-24.5			5' arm      3' arm
17752	+	97587	90	19.5	-27.7			5' arm      3' arm
17751	+	52591	89	24	-22.8			5' arm      3' arm
17746	+	5714	86	20.5	-21.8	NP_803579		5' arm      3' arm
17747	+	10330	90	24.5	-22.1	NP_803586		5' arm      3' arm
17764	-	11741	83	19	-21.9	NP_803589		5' arm      3' arm
17748	+	19072	87	19	-31.5	NP_803593		5' arm      3' arm
17749	+	25554	90	22.5	-21.9	NP_803598		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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