miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
904	+	8851	90	20.5	-23.7	NP_050281		5' arm      3' arm
896	+	5179	88	20.5	-23.8			5' arm      3' arm
892	+	2211	90	20.5	-24.4	NP_597818		5' arm      3' arm
895	+	5047	89	20.5	-21.1			5' arm      3' arm
900	+	7447	90	21	-24.4	NP_050281		5' arm      3' arm
938	-	29529	90	21	-22.7	NP_050292		5' arm      3' arm
908	+	11280	87	21	-28.8	NP_050282		5' arm      3' arm
917	+	23846	90	21	-29.2	NP_050289		5' arm      3' arm
945	-	38462	88	21	-20.2	NP_597828		5' arm      3' arm
915	+	17529	87	21	-24.39	NP_050284		5' arm      3' arm
913	+	15812	87	21	-20	NP_597823		5' arm      3' arm
890	+	1240	89	21.5	-26.6	NP_050279		5' arm      3' arm
940	-	31026	89	21.5	-23	NP_050293		5' arm      3' arm
939	-	30301	88	21.5	-19.8	NP_050293		5' arm      3' arm
929	-	17809	90	21.5	-19.6	NP_050284		5' arm      3' arm
916	+	23523	90	21.5	-22.4	NP_050289		5' arm      3' arm
926	-	13945	90	21.5	-22.2	NP_050283		5' arm      3' arm
901	+	8005	89	22	-20.6	NP_050281		5' arm      3' arm
894	+	2526	89	22	-19.7	NP_597818		5' arm      3' arm
910	+	12082	88	22	-20.5	NP_050282		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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