miRNA display CGI


Results 1 - 20 of 52 are showing below:
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GenBank Identifier RefSeq Acc. Name
32171002 NC_004914.1 Stx2 converting bacteriophage II virion

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
21992 - 21454 89 19 -20.52 NP_859295 5' arm      3' arm
21988 - 8773 90 19 -21.5 NP_859266 5' arm      3' arm
21967 + 21102 82 19 -20.8 NP_859300 5' arm      3' arm
21962 + 15484 87 19 -34.4 NP_859284 5' arm      3' arm
21997 - 37708 88 19 -19.8 NP_859347 5' arm      3' arm
21968 + 21272 88 19.5 -21.3 NP_859295 5' arm      3' arm
22002 - 55868 89 19.5 -21.81 NP_859395 5' arm      3' arm
21984 + 58319 84 19.5 -22 NP_859402 5' arm      3' arm
21989 - 9144 88 19.5 -21 NP_859265 5' arm      3' arm
21961 + 12879 90 19.5 -21.5 NP_859279 5' arm      3' arm
22000 - 46258 90 20 -20.5 NP_859372 5' arm      3' arm
21998 - 39350 89 20 -22.9 NP_859354 5' arm      3' arm
21996 - 36046 90 20 -21.1 NP_859340 5' arm      3' arm
22003 - 56197 86 20 -26.3 NP_859392 5' arm      3' arm
21966 + 19995 82 20 -22 NP_859295 5' arm      3' arm
21983 + 57971 90 20 -20.8 NP_859401 5' arm      3' arm
21963 + 16805 89 20 -23.4 NP_859288 5' arm      3' arm
21982 + 56766 86 20.5 -20.1 NP_859396 5' arm      3' arm
21959 + 10982 89 20.5 -21.2 NP_859275 5' arm      3' arm
22005 - 60646 90 20.5 -24.1 NP_859411 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.