miRNA display CGI


Results 21 - 40 of 52 are showing below:
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GenBank Identifier RefSeq Acc. Name
32171002 NC_004914.1 Stx2 converting bacteriophage II virion

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
21978 + 48148 89 21.5 -24.7 NP_859378 5' arm      3' arm
21969 + 22115 88 23 -24.5 NP_859295 5' arm      3' arm
21956 + 6798 89 23 -24.2 NP_859260 5' arm      3' arm
22005 - 60646 90 20.5 -24.1 NP_859411 5' arm      3' arm
21955 + 4249 88 23 -24 NP_859251 5' arm      3' arm
21974 + 31350 90 24 -23.8 5' arm      3' arm
21964 + 17595 84 23.5 -23.6 NP_859292 5' arm      3' arm
21963 + 16805 89 20 -23.4 NP_859288 5' arm      3' arm
21998 - 39350 89 20 -22.9 NP_859354 5' arm      3' arm
21957 + 7416 89 22.5 -22.3 NP_859262 5' arm      3' arm
21966 + 19995 82 20 -22 NP_859295 5' arm      3' arm
21984 + 58319 84 19.5 -22 NP_859402 5' arm      3' arm
21985 + 58709 85 21.5 -21.9 NP_859404 5' arm      3' arm
22002 - 55868 89 19.5 -21.81 NP_859395 5' arm      3' arm
21961 + 12879 90 19.5 -21.5 NP_859279 5' arm      3' arm
21988 - 8773 90 19 -21.5 NP_859266 5' arm      3' arm
21968 + 21272 88 19.5 -21.3 NP_859295 5' arm      3' arm
21959 + 10982 89 20.5 -21.2 NP_859275 5' arm      3' arm
21996 - 36046 90 20 -21.1 NP_859340 5' arm      3' arm
21989 - 9144 88 19.5 -21 NP_859265 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.