miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
22252	+	12749	88	19	-23.4	NP_877458		5' arm      3' arm
22253	+	13016	90	21.5	-22.5	NP_877458		5' arm      3' arm
22254	+	13163	90	19.5	-27.3	NP_877458		5' arm      3' arm
22255	+	13377	89	21.5	-22.1	NP_877458		5' arm      3' arm
22256	+	14994	90	21	-26.5	NP_877460		5' arm      3' arm
22257	+	15755	89	20	-22.2	NP_877461		5' arm      3' arm
22258	+	16067	85	20	-22.5	NP_877462		5' arm      3' arm
22259	+	16723	90	22	-21.1	NP_877463		5' arm      3' arm
22260	+	20058	90	21	-21.6	NP_877465		5' arm      3' arm
22261	+	21645	89	23	-30.9	NP_877469		5' arm      3' arm
22262	+	21748	89	19.5	-21.8	NP_877469		5' arm      3' arm
22263	+	22391	90	19.5	-20.6			5' arm      3' arm
22264	+	24552	89	19	-20	NP_877471		5' arm      3' arm
22265	+	25084	87	19	-22	NP_877471		5' arm      3' arm
22266	+	25209	80	29.5	-31.6			5' arm      3' arm
22267	+	25859	90	19.5	-27.9	NP_877473		5' arm      3' arm
22268	+	27763	89	20.5	-20.3	NP_877473		5' arm      3' arm
22269	+	27876	90	21.5	-23	NP_877473		5' arm      3' arm
22270	+	28541	89	21	-30.9	NP_877474		5' arm      3' arm
22271	+	28630	89	19	-27.8	NP_877474		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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