miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
18213	-	40121	89	22.5	-36.7			5' arm      3' arm
18205	-	34353	88	22.5	-36.4			5' arm      3' arm
18104	+	21284	90	24	-35.6	NP_817358		5' arm      3' arm
18173	-	11048	90	20	-33.8	NP_817352		5' arm      3' arm
18201	-	32962	87	22.5	-32.5			5' arm      3' arm
18176	-	12903	87	21	-32.5	NP_817352		5' arm      3' arm
18177	-	13219	89	20.5	-32.1	NP_817353		5' arm      3' arm
18220	-	45273	89	19	-32	NP_817408		5' arm      3' arm
18134	+	38731	88	20.5	-31.9	NP_817394		5' arm      3' arm
18174	-	12140	90	21.5	-31.4	NP_817352		5' arm      3' arm
18232	-	52564	87	26	-31.4	NP_817434		5' arm      3' arm
18163	-	1198	86	19.5	-31.3	NP_817340		5' arm      3' arm
18136	+	41037	86	20.5	-30.8	NP_817397		5' arm      3' arm
18129	+	36244	89	19	-30.6	NP_817387		5' arm      3' arm
18128	+	35384	82	23	-30.2	NP_817386		5' arm      3' arm
18047	+	627	90	22.5	-29.6	NP_817340		5' arm      3' arm
18162	+	55041	88	21	-29.6	NP_817442		5' arm      3' arm
18188	-	25808	89	22.5	-29.2	NP_817365		5' arm      3' arm
18086	+	12678	90	19.5	-29	NP_817352		5' arm      3' arm
18193	-	28322	90	21.5	-29	NP_817371		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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