miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
19200	-	35241	89	23.5	-35.6	NP_817797		5' arm      3' arm
19014	+	24498	88	22.5	-35.6	NP_817790		5' arm      3' arm
18987	+	7730	89	21.5	-35	NP_817772		5' arm      3' arm
19040	+	35217	86	24	-35	NP_817797		5' arm      3' arm
19210	-	38446	89	22.5	-35	NP_817802		5' arm      3' arm
19067	+	46496	87	22	-34.9	NP_817811		5' arm      3' arm
19149	-	15246	88	23	-34.3	NP_817777		5' arm      3' arm
19249	-	59362	89	21	-34	NP_817831		5' arm      3' arm
19052	+	41225	90	22.5	-33.9	NP_817807		5' arm      3' arm
19254	-	61191	87	22.5	-33.7			5' arm      3' arm
19114	+	64598	88	25	-33.6	NP_817844		5' arm      3' arm
19096	+	56529	86	19.5	-33.3	NP_817826		5' arm      3' arm
19158	-	18853	89	20.5	-33.29			5' arm      3' arm
19209	-	37567	85	19.5	-32.8			5' arm      3' arm
19104	+	59276	88	27.5	-32.8	NP_817831		5' arm      3' arm
19092	+	55596	89	19.5	-32.7	NP_817824		5' arm      3' arm
19112	+	63952	90	21.5	-32.5	NP_817844		5' arm      3' arm
19053	+	41420	90	24	-32.2	NP_817807		5' arm      3' arm
19216	-	41312	85	19.5	-32.2	NP_817807		5' arm      3' arm
19261	-	67118	88	22.5	-32.2	NP_817851		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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