miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
30518360 NC_004800.1 Goose hemorrhagic polyomavirus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
21357 + 1124 89 23.5 -21.4 NP_849167 5' arm      3' arm
21358 + 1272 90 20 -23.2 NP_849167 5' arm      3' arm
21359 - 635 87 22 -29.8 NP_849166 5' arm      3' arm
21360 - 768 89 22.5 -24.9 NP_849166 5' arm      3' arm
21361 - 1417 87 20 -19.5 NP_849167 5' arm      3' arm
21362 - 1894 90 22.5 -20.4 NP_849167 5' arm      3' arm
21363 - 5217 89 21.5 -19.9 NP_849171 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.