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| GenBank Identifier | RefSeq Acc. | Name |
| 76253626 | NC_007415.1 | Sclerotinia sclerotiorum debilitation-associated RNA virus |
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| ID | strand | start position | length | sRNA loop score | core MFE. |
NP ORF
|
Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 32885 | + | 3475 | 90 | 21.5 | -21.9 | YP_325662 | 5' arm 3' arm | ||
| 32884 | + | 3140 | 82 | 21 | -23.3 | YP_325662 | 5' arm 3' arm | ||
| 32886 | + | 3663 | 90 | 20 | -22.2 | YP_325662 | 5' arm 3' arm | ||
| 32888 | - | 1820 | 90 | 24 | -27.6 | YP_325662 | 5' arm 3' arm | ||
| 32889 | - | 3221 | 82 | 21.5 | -22.5 | YP_325662 | 5' arm 3' arm | ||
| 32887 | - | 182 | 87 | 22.5 | -20.8 | YP_325662 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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