miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
9845214 NC_002510.1 Cotton leaf curl Gezira virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
8941 - 1897 87 21.5 -19.7 NP_062871 5' arm      3' arm
8940 - 106 90 22.5 -22.8 5' arm      3' arm
8939 + 2301 83 22 -20.3 NP_062872 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.