miRNA display CGI


Results 1 - 13 of 13 are showing below:
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GenBank Identifier RefSeq Acc. Name
29567085 NC_004690.1 Adoxophyes honmai nucleopolyhedrovirus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
20921 + 23546 86 26.5 -19.6 5' arm      3' arm
20922 + 26158 89 26.5 -25.7 5' arm      3' arm
20923 + 33537 89 22.5 -27.7 NP_818684 5' arm      3' arm
20924 + 56708 90 21 -23.4 NP_818710 5' arm      3' arm
20925 + 84773 85 24 -28.5 5' arm      3' arm
20927 - 19241 85 22.5 -23.82 NP_818669 5' arm      3' arm
20928 - 23505 81 24.5 -29.1 5' arm      3' arm
20930 - 26244 89 25.5 -25.1 5' arm      3' arm
20929 - 25863 90 27 -23.5 5' arm      3' arm
20931 - 84857 85 22.5 -24 5' arm      3' arm
20932 - 86578 84 23 -21.6 NP_818743 5' arm      3' arm
20933 - 101928 87 19 -24.66 NP_818764 5' arm      3' arm
20926 - 18745 88 21.5 -23.9 NP_818668 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.