miRNA display CGI


Results 1 - 20 of 35 are showing below:
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GenBank Identifier RefSeq Acc. Name
58532811 NC_006820.1 Bacteriophage S-PM2 virion

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
31565 - 163509 88 22 -27.8 5' arm      3' arm
31564 - 156950 90 21 -21 YP_195243 5' arm      3' arm
31563 - 146092 89 20.5 -20.8 YP_195234 5' arm      3' arm
31562 - 114181 87 20.5 -21.9 YP_195186 5' arm      3' arm
31561 - 78590 89 24 -25.3 YP_195141 5' arm      3' arm
31560 - 69942 79 24 -22.2 YP_195131 5' arm      3' arm
31559 - 58400 90 22.5 -22.3 YP_195122 5' arm      3' arm
31558 - 24461 89 22 -21.8 5' arm      3' arm
31557 - 24247 89 21.5 -24.8 5' arm      3' arm
31556 - 24130 90 22.5 -24.7 5' arm      3' arm
31555 - 23585 89 21 -20.4 5' arm      3' arm
31554 - 23411 90 21.5 -26.7 5' arm      3' arm
31553 - 22419 87 22 -23.4 YP_195106 5' arm      3' arm
31552 - 22325 90 19.5 -23.7 5' arm      3' arm
31551 - 22097 90 22 -22.2 5' arm      3' arm
31550 - 21928 90 22 -20.2 YP_195105 5' arm      3' arm
31549 - 21727 85 19.5 -22.2 YP_195105 5' arm      3' arm
31548 + 193198 90 19 -21.9 YP_195267 5' arm      3' arm
31547 + 164485 90 23 -19.5 5' arm      3' arm
31546 + 152186 75 21.5 -27.7 YP_195242 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.