miRNA display CGI


Results 1 - 20 of 28 are showing below:
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GenBank Identifier RefSeq Acc. Name
34610126 NC_005092.1 Ectropis obliqua picorna-like virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
22767 - 9223 87 19 -28.2 NP_919029 5' arm      3' arm
22766 - 9011 90 19.5 -22.2 NP_919029 5' arm      3' arm
22756 + 7764 82 19.5 -30.4 NP_919029 5' arm      3' arm
22762 - 2849 89 19.5 -20.8 NP_919029 5' arm      3' arm
22761 - 1642 89 20 -19.8 NP_919029 5' arm      3' arm
22745 + 2995 89 20.5 -28.5 NP_919029 5' arm      3' arm
22753 + 7127 90 21 -24.4 NP_919029 5' arm      3' arm
22759 - 563 89 21.5 -25.81 NP_919029 5' arm      3' arm
22741 + 992 90 21.5 -25.9 NP_919029 5' arm      3' arm
22742 + 1276 87 21.5 -25.16 NP_919029 5' arm      3' arm
22760 - 1081 90 22.5 -22.9 NP_919029 5' arm      3' arm
22743 + 1910 89 23 -25.8 NP_919029 5' arm      3' arm
22758 + 9137 89 23 -22.7 NP_919029 5' arm      3' arm
22757 + 8871 88 24 -27 NP_919029 5' arm      3' arm
22740 + 475 90 24.5 -22.91 NP_919029 5' arm      3' arm
22748 + 4057 90 24.5 -21.9 NP_919029 5' arm      3' arm
22751 + 5006 86 25 -24.7 NP_919029 5' arm      3' arm
22750 + 4416 89 25 -21.8 NP_919029 5' arm      3' arm
22763 - 3367 87 25 -23.9 NP_919029 5' arm      3' arm
22765 - 4005 90 25.5 -20.8 NP_919029 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.