miRNA display CGI


Results 1 - 6 of 6 are showing below:
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GenBank Identifier RefSeq Acc. Name
38639801 NC_005265.1 Sulfolobus spindle-shaped virus 2

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
24764 + 2897 89 24 -22.9 NP_944457 5' arm      3' arm
24765 + 3020 90 22.5 -22.9 NP_944457 5' arm      3' arm
24766 + 3156 90 24 -23.4 NP_944460 5' arm      3' arm
24767 + 4731 88 23 -19.9 NP_944462 5' arm      3' arm
24768 - 3047 90 21.5 -22.3 NP_944459 5' arm      3' arm
24769 - 3171 90 21.5 -22.3 NP_944457 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.