miRNA display CGI


Results 1 - 20 of 186 are showing below:
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GenBank Identifier RefSeq Acc. Name
45429984 NC_005809.1 Bordetella phage BIP-1

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
26938 - 18015 90 20 -25.8 5' arm      3' arm
26878 + 20612 86 20 -26.5 5' arm      3' arm
26947 - 24151 87 22 -32.7 5' arm      3' arm
26961 - 31854 85 22 -24.3 5' arm      3' arm
26962 - 32153 89 23 -27.4 5' arm      3' arm
26990 - 39201 88 20.5 -22.9 5' arm      3' arm
26979 - 36393 88 24.5 -22.7 5' arm      3' arm
26814 + 637 83 19.5 -29.5 NP_996612 5' arm      3' arm
26915 - 419 88 21.5 -21.7 NP_996612 5' arm      3' arm
26817 + 1177 90 22.5 -22 NP_996613 5' arm      3' arm
26816 + 1074 89 20.5 -24.8 NP_996613 5' arm      3' arm
26815 + 823 88 19 -22.7 NP_996613 5' arm      3' arm
26916 - 1050 90 20 -25.3 NP_996613 5' arm      3' arm
26917 - 1495 90 20 -28.1 NP_996614 5' arm      3' arm
26818 + 1656 90 22 -22.9 NP_996615 5' arm      3' arm
26918 - 1596 85 22 -29.6 NP_996615 5' arm      3' arm
26819 + 2165 90 19.5 -28.2 NP_996616 5' arm      3' arm
26821 + 2657 89 23 -24.3 NP_996616 5' arm      3' arm
26820 + 2545 90 24 -22.6 NP_996616 5' arm      3' arm
26919 - 2177 90 21 -24.3 NP_996616 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.