miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
9625665 NC_001346.1 Maize streak virus - A[South Africa]

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
1536 - 1295 89 20 -31.1 NP_039919 5' arm      3' arm
1535 - 506 90 21 -20.8 NP_039917 5' arm      3' arm
1534 + 737 90 21.5 -21.6 NP_039918 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.