miRNA display CGI


Results 1 - 16 of 16 are showing below:
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GenBank Identifier RefSeq Acc. Name
54193767 NC_006367.1 Magnaporthe grisea virus 1

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
30310 + 2103 85 19 -32.9 YP_122351 5' arm      3' arm
30308 + 1414 89 26.5 -28.1 YP_122351 5' arm      3' arm
30309 + 1866 88 20.5 -27.4 YP_122351 5' arm      3' arm
30311 + 2228 90 20 -26.2 YP_122351 5' arm      3' arm
30314 + 2805 84 22.5 -25.9 YP_122352 5' arm      3' arm
30319 - 3672 87 22.5 -25.4 YP_122352 5' arm      3' arm
30312 + 2384 85 19.5 -25.2 YP_122351 5' arm      3' arm
30313 + 2605 89 21.5 -25.1 YP_122351 5' arm      3' arm
30317 - 2149 90 19 -24.7 YP_122351 5' arm      3' arm
30307 + 1185 90 21 -24.2 YP_122351 5' arm      3' arm
30315 + 3667 82 22.5 -24.2 YP_122352 5' arm      3' arm
30316 - 1502 89 20.5 -23.4 YP_122351 5' arm      3' arm
30320 - 4212 87 19 -23.1 YP_122352 5' arm      3' arm
30321 - 4316 88 20.5 -21.8 YP_122352 5' arm      3' arm
30318 - 2891 88 20 -20.1 YP_122352 5' arm      3' arm
30306 + 687 90 22.5 -19.5 YP_122351 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.