miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
55770816 NC_006442.1 Cherry chlorotic rusty spot associated partitivirus RNA 1

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
30372 - 612 89 21.5 -21.3 YP_138538 5' arm      3' arm
30373 - 1139 89 19 -25.9 YP_138539 5' arm      3' arm
30374 - 1287 90 22 -20.6 YP_138539 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.