miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
11462417 NC_002615.1 European brown hare syndrome virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
9825 - 178 84 24 -29 NP_068828 5' arm      3' arm
9826 - 2828 89 21 -28.8 NP_068828 5' arm      3' arm
9823 + 5120 90 19 -23.6 NP_068828 5' arm      3' arm
9824 + 5359 78 20.5 -23 NP_068828 5' arm      3' arm
9827 - 5403 89 21.5 -22.8 NP_068828 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.