miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
33050	+	16844	87	19.5	-21.4	YP_355381		5' arm      3' arm
33051	+	16957	89	21	-29.4	YP_355381		5' arm      3' arm
33052	+	17712	89	22	-21.5	YP_355381		5' arm      3' arm
33053	+	20767	88	21.5	-23.1	YP_355388		5' arm      3' arm
33054	+	21237	88	20	-21.5	YP_355388		5' arm      3' arm
33055	+	21337	87	20.5	-30.2	YP_355388		5' arm      3' arm
33056	+	21598	87	20	-21.3	YP_355388		5' arm      3' arm
33057	+	22101	89	21.5	-26			5' arm      3' arm
33058	+	22282	89	21	-20.6	YP_355390		5' arm      3' arm
33059	+	23109	90	21.5	-23.2	YP_355392		5' arm      3' arm
33060	+	23317	89	20.5	-27.4	YP_355391		5' arm      3' arm
33061	+	24577	88	20.5	-26.2	YP_355395		5' arm      3' arm
33062	+	25610	90	22.5	-22.7	YP_355397		5' arm      3' arm
33063	+	25767	86	20.5	-21.1	YP_355397		5' arm      3' arm
33064	+	25866	87	20.5	-21.8	YP_355397		5' arm      3' arm
33065	+	26292	82	19	-25.7	YP_355397		5' arm      3' arm
33066	+	27285	87	19	-25.3	YP_355397		5' arm      3' arm
33067	+	27801	90	22	-21	YP_355397		5' arm      3' arm
33068	+	27967	90	20	-27.5	YP_355397		5' arm      3' arm
33069	+	29373	87	20.5	-25	YP_355399		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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