miRNA display CGI


Results 1 - 14 of 14 are showing below:
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GenBank Identifier RefSeq Acc. Name
15426259 NC_003092.1 Simian hemorrhagic fever virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
11617 + 301 84 19.5 -21.6 NP_742092 5' arm      3' arm
11618 + 582 89 21.5 -20.8 NP_742092 5' arm      3' arm
11619 + 2305 89 26.5 -25.7 NP_203542 5' arm      3' arm
11620 + 2717 89 19.5 -21.6 NP_742092 5' arm      3' arm
11621 + 11350 90 19.5 -22.8 NP_203544 5' arm      3' arm
11622 - 947 89 19 -25.7 NP_203542 5' arm      3' arm
11623 - 2602 89 21.5 -25.6 NP_742092 5' arm      3' arm
11624 - 2904 83 20 -23.3 NP_742092 5' arm      3' arm
11625 - 6957 90 19 -24 NP_742092 5' arm      3' arm
11626 - 8265 90 21.5 -21.7 NP_742092 5' arm      3' arm
11627 - 9150 80 19 -19.7 NP_742092 5' arm      3' arm
11628 - 9755 90 19.5 -30 NP_742092 5' arm      3' arm
11629 - 10272 88 19 -21.4 NP_742092 5' arm      3' arm
11630 - 15658 86 21 -19.7 NP_203552 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.