miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
11072110 NC_002598.1 Panicum mosaic virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
9814 + 1240 89 20 -26.7 NP_068343 5' arm      3' arm
9815 - 626 89 19.5 -19.4 NP_068343 5' arm      3' arm
9816 - 2990 86 24 -26.4 NP_068345 5' arm      3' arm
9817 - 3560 89 21.5 -19.5 NP_068347 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.