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GenBank Identifier | RefSeq Acc. | Name |
20070095 | NC_003501.1 | Brome streak mosaic virus |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
13901 | + | 9275 | 90 | 21 | -21.3 | NP_612585 | 5' arm 3' arm | ||
13902 | + | 9375 | 90 | 19.5 | -20.3 | NP_612585 | 5' arm 3' arm | ||
13903 | + | 9579 | 87 | 20 | -20.2 | 5' arm 3' arm | |||
13906 | - | 9284 | 89 | 20 | -24.8 | NP_612585 | 5' arm 3' arm | ||
13904 | - | 569 | 90 | 21.5 | -23 | NP_612585 | 5' arm 3' arm | ||
13905 | - | 843 | 90 | 19.5 | -19.9 | NP_612585 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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